MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-582

Family name MIR-582 (all species)
Seed UACAGUU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-582-v1  Bta-Mir-582-v2  Cfa-Mir-582-v1  Cfa-Mir-582-v2  Cpo-Mir-582-v1  Cpo-Mir-582-v2  Dno-Mir-582-v1  Dno-Mir-582-v2  Eca-Mir-582  Hsa-Mir-582-v1  Hsa-Mir-582-v2  Laf-Mir-582-v1  Laf-Mir-582-v2  Mml-Mir-582-v1  Mml-Mir-582-v2  Mmr-Mir-582-v1  Mmr-Mir-582-v2  Mmu-Mir-582-v1  Mmu-Mir-582-v2  Ocu-Mir-582  Pab-Mir-582-v1  Pab-Mir-582-v2  Rno-Mir-582-v1  Rno-Mir-582-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021916.1: 146882702-146882761 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACCACAACAAGUCAGUCUGUGCUCUUUGAUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACUGGUUGAACAACUGAACCCAAAGGGUGCAAAGUAGAAACAUUUCGUUGU
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Structure
        10          20        30        40        50         
GACCACAACAAGUCAGUC--| UG       AUUA                   UAAUCU 
                    UG  CUCUUUG    CAGUUGUUCAACCAGUUAC      A
                    AC  GGGAAAC    GUCAACAAGUUGGUCAAUG      A
UGUUGCUUUACAAAGAUGAA^ GU       CCAA                   UUAAUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cja-Mir-582_5p
mirBase accessionNone
Sequence 
0- UUACAGUUGUUCAACCAGUUAC -22
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Star sequence

Cja-Mir-582_3p* (predicted)
mirBase accessionNone
Sequence 
38- AACUGGUUGAACAACUGAACCC -60
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