| MirGeneDB ID | Cja-Mir-582 |
|---|---|
| Family name | MIR-582 (all species) |
| Seed | UACAGUU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-582-v1 Bta-Mir-582-v2 Cfa-Mir-582-v1 Cfa-Mir-582-v2 Cpo-Mir-582-v1 Cpo-Mir-582-v2 Dno-Mir-582-v1 Dno-Mir-582-v2 Eca-Mir-582 Hsa-Mir-582-v1 Hsa-Mir-582-v2 Laf-Mir-582-v1 Laf-Mir-582-v2 Mml-Mir-582-v1 Mml-Mir-582-v2 Mmr-Mir-582-v1 Mmr-Mir-582-v2 Mmu-Mir-582-v1 Mmu-Mir-582-v2 Ocu-Mir-582 Pab-Mir-582-v1 Pab-Mir-582-v2 Rno-Mir-582-v1 Rno-Mir-582-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021916.1: 146882702-146882761 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GACCACAACAAGUCAGUCUGUGCUCUUUGAUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACUGGUUGAACAACUGAACCCAAAGGGUGCAAAGUAGAAACAUUUCGUUGUGet precursor sequence |
| Structure | 10 20 30 40 50 GACCACAACAAGUCAGUC--| UG AUUA UAAUCU UG CUCUUUG CAGUUGUUCAACCAGUUAC A AC GGGAAAC GUCAACAAGUUGGUCAAUG A UGUUGCUUUACAAAGAUGAA^ GU CCAA UUAAUC . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-582_5p |
| mirBase accession | None |
| Sequence |
0- UUACAGUUGUUCAACCAGUUAC -22
Get sequence
|
| Star sequence | Cja-Mir-582_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- AACUGGUUGAACAACUGAACCC -60
Get sequence
|
