MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-582

Family name MIR-582 (all species)
Seed AACCGGC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-582
Paralogues
Orthologues Bta-Mir-582-v1  Bta-Mir-582-v2  Cfa-Mir-582-v1  Cfa-Mir-582-v2  Cja-Mir-582  Cpo-Mir-582-v1  Cpo-Mir-582-v2  Dno-Mir-582-v1  Dno-Mir-582-v2  Eca-Mir-582  Hsa-Mir-582-v1  Hsa-Mir-582-v2  Laf-Mir-582-v1  Laf-Mir-582-v2  Mml-Mir-582-v1  Mml-Mir-582-v2  Mmr-Mir-582-v1  Mmr-Mir-582-v2  Mmu-Mir-582-v1  Mmu-Mir-582-v2  Pab-Mir-582-v1  Pab-Mir-582-v2  Rno-Mir-582-v1  Rno-Mir-582-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chr11: 75636026-75636085 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACCUCACCACGGCAAUCUGUACUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAGUGUAACCGGCUAAACAACUGAACCCAAAGGGUGCAAAGUGAGAACAUUUCAUUGA
Get precursor sequence
Structure
        10          20        30        40        50         
CACCUCACCACGGCAAUC--|           UUA        CAA  A     UAAUCU 
                    UGUACUCUUUGG   CAGUUGUU   CC GUUAC      A
                    ACGUGGGAAACC   GUCAACAA   GG CAAUG      A
AGUUACUUUACAAGAGUGAA^           CAA        AUC  C     UGAAUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
He Ki Te To Wh
Star sequence

Ocu-Mir-582_5p*

mirBase accessionMIMAT0048533
Sequence
0- UUACAGUUGUUCAACCAGUUACU -23
Get sequence
Mature sequence

Ocu-Mir-582_3p

mirBase accessionMIMAT0048534
Sequence
37- UAACCGGCUAAACAACUGAACCC -60
Get sequence