MirGeneDB ID | Eca-Mir-582 |
Family name |
MIR-582 (all species) |
Seed |
UACAGUU |
Species |
Horse (Equus caballus) |
MiRBase ID |
eca-mir-582
|
Paralogues |
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Orthologues |
Bta-Mir-582-v1
Bta-Mir-582-v2
Cfa-Mir-582-v1
Cfa-Mir-582-v2
Cja-Mir-582
Cpo-Mir-582-v1
Cpo-Mir-582-v2
Dno-Mir-582-v1
Dno-Mir-582-v2
Hsa-Mir-582-v1
Hsa-Mir-582-v2
Laf-Mir-582-v1
Laf-Mir-582-v2
Mml-Mir-582-v1
Mml-Mir-582-v2
Mmr-Mir-582-v1
Mmr-Mir-582-v2
Mmu-Mir-582-v1
Mmu-Mir-582-v2
Ocu-Mir-582
Pab-Mir-582-v1
Pab-Mir-582-v2
Rno-Mir-582-v1
Rno-Mir-582-v2
|
Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCA_002863925.1_EquCab3.0) |
CM009168.1: 13877222-13877281 [+]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
CACCUCAACAUGUCAAUCUGUACUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACCGGUUGAACAACUGAACCCAAAGGGUGCAAAGUGGAAACAUUUCAGUGA
Get precursor sequence
|
Structure | 10 20 30 40 50
CACCUCAACAUGUCAAUC--| UUA A UAAUCU
UGUACUCUUUGG CAGUUGUUCAACC GUUAC A
ACGUGGGAAACC GUCAACAAGUUGG CAAUG A
AGUGACUUUACAAAGGUGAA^ CAA C UUAAUC
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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Mature sequence |
Eca-Mir-582_5p |
mirBase accession | MIMAT0013103 |
Sequence |
0- UUACAGUUGUUCAACCAGUUACU -23
Get sequence
|
Co-mature sequence |
Eca-Mir-582_3p |
mirBase accession | MIMAT0013104 |
Sequence |
38- AACCGGUUGAACAACUGAACCC -60
Get sequence
|