MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-582

Family name MIR-582 (all species)
Seed UACAGUU
Species Horse (Equus caballus)
MiRBase ID eca-mir-582
Paralogues
Orthologues Bta-Mir-582-v1  Bta-Mir-582-v2  Cfa-Mir-582-v1  Cfa-Mir-582-v2  Cja-Mir-582  Cpo-Mir-582-v1  Cpo-Mir-582-v2  Dno-Mir-582-v1  Dno-Mir-582-v2  Hsa-Mir-582-v1  Hsa-Mir-582-v2  Laf-Mir-582-v1  Laf-Mir-582-v2  Mml-Mir-582-v1  Mml-Mir-582-v2  Mmr-Mir-582-v1  Mmr-Mir-582-v2  Mmu-Mir-582-v1  Mmu-Mir-582-v2  Ocu-Mir-582  Pab-Mir-582-v1  Pab-Mir-582-v2  Rno-Mir-582-v1  Rno-Mir-582-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)
CM009168.1: 13877222-13877281 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACCUCAACAUGUCAAUCUGUACUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACCGGUUGAACAACUGAACCCAAAGGGUGCAAAGUGGAAACAUUUCAGUGA
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Structure
        10          20        30        40        50         
CACCUCAACAUGUCAAUC--|           UUA             A     UAAUCU 
                    UGUACUCUUUGG   CAGUUGUUCAACC GUUAC      A
                    ACGUGGGAAACC   GUCAACAAGUUGG CAAUG      A
AGUGACUUUACAAAGGUGAA^           CAA             C     UUAAUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-582_5p

mirBase accessionMIMAT0013103
Sequence
0- UUACAGUUGUUCAACCAGUUACU -23
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Co-mature sequence

Eca-Mir-582_3p

mirBase accessionMIMAT0013104
Sequence
38- AACCGGUUGAACAACUGAACCC -60
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