Mir-582-v2

MirGeneDB ID

Cpo-Mir-582-v2

Family name

MIR-582 (all species)

Seed

AACCGGU

Species

Guinea pig (Cavia porcellus)

MiRBase ID

cpo-mir-582

Paralogues

Cpo-Mir-582-v1

Orthologues

Bta-Mir-582-v2 Cfa-Mir-582-v2 Cja-Mir-582 Dno-Mir-582-v2 Eca-Mir-582 Hsa-Mir-582-v2 Laf-Mir-582-v2 Mml-Mir-582-v2 Mmr-Mir-582-v2 Mmu-Mir-582-v2 Ocu-Mir-582 Pab-Mir-582-v2 Rno-Mir-582-v2

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(cavPor3)

scaffold_29: 2467346-2467403 [+] UCSC

Clustered miRNAs
(< 50kb from Mir-582-v2)

Mir-582-v1 scaffold_29: 2467345-2467404 [+] UCSC
Mir-582-v2 scaffold_29: 2467346-2467403 [+] UCSC

Precursor
(pre-Mir +30nt flank)

ACCUCAACACAGCAAUCUGUACUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUUUAACUAAUUGUAACCGGUUGAACAACUGAACCCAAAGGGUGCAAAGUGAAAACAUUUCACUG

Get precursor sequence

Structure

        10          20        30        40        50        
ACCUCAACACAGCAAUC--|           UUA             A     UAAUUU 
                   UGUACUCUUUGG   CAGUUGUUCAACC GUUAC      A
                   ACGUGGGAAACC   GUCAACAAGUUGG CAAUG      A
GUCACUUUACAAAAGUGAA^           CAA             C     UUAAUC 
      110       100        90        80        70        60