MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-582-v2

Family name MIR-582 (all species)
Seed ACAGUUG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-582-v1 
Orthologues Bta-Mir-582-v2  Cfa-Mir-582-v2  Cja-Mir-582  Cpo-Mir-582-v2  Dno-Mir-582-v2  Eca-Mir-582  Hsa-Mir-582-v2  Laf-Mir-582-v2  Mml-Mir-582-v2  Mmr-Mir-582-v2  Mmu-Mir-582-v2  Ocu-Mir-582  Rno-Mir-582-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054683.2: 68851657-68851714 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCACAACAAGUCAAUCUGUGCUCUUUGAUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACUGGUUGAACAACUGAACCCAAAGGGUGCAAAGUAGAAACAUUUCAUUG
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Structure
        10          20        30        40        50        
ACCACAACAAGUCAAUC--| UG       AUUA                   UAAUCU 
                   UG  CUCUUUG    CAGUUGUUCAACCAGUUAC      A
                   AC  GGGAAAC    GUCAACAAGUUGGUCAAUG      A
GUUACUUUACAAAGAUGAA^ GU       CCAA                   UUAAUC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-582-v2_5p

mirBase accessionNone
Sequence
0- UACAGUUGUUCAACCAGUUACU -22
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Star sequence

Pab-Mir-582-v2_3p*

mirBase accessionNone
Sequence
36- UAACUGGUUGAACAACUGAACC -58
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