MirGeneDB ID | Pab-Mir-582-v2 |
---|---|
Family name | MIR-582 (all species) |
Seed | ACAGUUG |
Species | Sumatran orangutan (Pongo abelii) |
MiRBase ID | |
Paralogues | Pab-Mir-582-v1 |
Orthologues | Bta-Mir-582-v2 Cfa-Mir-582-v2 Cja-Mir-582 Cpo-Mir-582-v2 Dno-Mir-582-v2 Eca-Mir-582 Hsa-Mir-582-v2 Laf-Mir-582-v2 Mml-Mir-582-v2 Mmr-Mir-582-v2 Mmu-Mir-582-v2 Ocu-Mir-582 Rno-Mir-582-v2 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054683.2: 68851657-68851714 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | ACCACAACAAGUCAAUCUGUGCUCUUUGAUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACUGGUUGAACAACUGAACCCAAAGGGUGCAAAGUAGAAACAUUUCAUUGGet precursor sequence |
Structure | 10 20 30 40 50 ACCACAACAAGUCAAUC--| UG AUUA UAAUCU UG CUCUUUG CAGUUGUUCAACCAGUUAC A AC GGGAAAC GUCAACAAGUUGGUCAAUG A GUUACUUUACAAAGAUGAA^ GU CCAA UUAAUC 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Mature sequence | Pab-Mir-582-v2_5p |
mirBase accession | None |
Sequence |
0- UACAGUUGUUCAACCAGUUACU -22
Get sequence
|
Star sequence | Pab-Mir-582-v2_3p* |
mirBase accession | None |
Sequence |
36- UAACUGGUUGAACAACUGAACC -58
Get sequence
|