| MirGeneDB ID | Pab-Mir-582-v1 |
|---|---|
| Family name | MIR-582 (all species) |
| Seed | UACAGUU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-582-v2 |
| Orthologues | Bta-Mir-582-v1 Cfa-Mir-582-v1 Cja-Mir-582 Cpo-Mir-582-v1 Dno-Mir-582-v1 Eca-Mir-582 Hsa-Mir-582-v1 Laf-Mir-582-v1 Mml-Mir-582-v1 Mmr-Mir-582-v1 Mmu-Mir-582-v1 Ocu-Mir-582 Rno-Mir-582-v1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054683.2: 68851656-68851715 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GACCACAACAAGUCAAUCUGUGCUCUUUGAUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACUGGUUGAACAACUGAACCCAAAGGGUGCAAAGUAGAAACAUUUCAUUGUGet precursor sequence |
| Structure | 10 20 30 40 50 GACCACAACAAGUCAAUC--| UG AUUA UAAUCU UG CUCUUUG CAGUUGUUCAACCAGUUAC A AC GGGAAAC GUCAACAAGUUGGUCAAUG A UGUUACUUUACAAAGAUGAA^ GU CCAA UUAAUC . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Pab-Mir-582-v1_5p |
| mirBase accession | None |
| Sequence |
0- UUACAGUUGUUCAACCAGUUAC -22
Get sequence
|
| Star sequence | Pab-Mir-582-v1_3p* |
| mirBase accession | None |
| Sequence |
38- AACUGGUUGAACAACUGAACCC -60
Get sequence
|
