MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-582-v1

Family name MIR-582 (all species)
Seed UACAGUU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-582
Paralogues Dno-Mir-582-v2 
Orthologues Bta-Mir-582-v1  Cfa-Mir-582-v1  Cpo-Mir-582-v1  Hsa-Mir-582-v1  Mml-Mir-582-v1  Mmu-Mir-582-v1  Ocu-Mir-582  Rno-Mir-582-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH568145: 3349266-3349325 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-582-v1)
Mir-582-v1 JH568145: 3349266-3349325 [-] UCSC Ensembl
Mir-582-v2 JH568145: 3349267-3349324 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACCUCCGCCCGUCAAUCUGUACUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUCUAACUAAUUGUAACCGGUUGAACAACUGAACCCAAAGGGUGCAAAGUGGAAACAUUUCAUUGA
Get precursor sequence
Structure
        10          20        30        40        50         
GACCUCCGCCCGUCAAUC--|           UUA             A     UAAUCU 
                    UGUACUCUUUGG   CAGUUGUUCAACC GUUAC      A
                    ACGUGGGAAACC   GUCAACAAGUUGG CAAUG      A
AGUUACUUUACAAAGGUGAA^           CAA             C     UUAAUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Dno-Mir-582-v1_5p

mirBase accessionMIMAT0047980
Sequence
0- UUACAGUUGUUCAACCAGUUAC -22
Get sequence
Star sequence

Dno-Mir-582-v1_3p*

mirBase accessionMIMAT0047981
Sequence
38- AACCGGUUGAACAACUGAACCC -60
Get sequence