MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-582-v1

Family name MIR-582 (all species)
Seed ACCGGUU
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-582
Paralogues Cpo-Mir-582-v2 
Orthologues Bta-Mir-582-v1  Cfa-Mir-582-v1  Dno-Mir-582-v1  Hsa-Mir-582-v1  Mml-Mir-582-v1  Mmu-Mir-582-v1  Ocu-Mir-582  Rno-Mir-582-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_29: 2467345-2467404 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-582-v1)		 Mir-582-v1 scaffold_29: 2467345-2467404 [+] UCSC
Mir-582-v2 scaffold_29: 2467346-2467403 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CACCUCAACACAGCAAUCUGUACUCUUUGGUUACAGUUGUUCAACCAGUUACUAAUUUAACUAAUUGUAACCGGUUGAACAACUGAACCCAAAGGGUGCAAAGUGAAAACAUUUCACUGA
Get precursor sequence
Structure
        10          20        30        40        50         
CACCUCAACACAGCAAUC--|           UUA             A     UAAUUU 
                    UGUACUCUUUGG   CAGUUGUUCAACC GUUAC      A
                    ACGUGGGAAACC   GUCAACAAGUUGG CAAUG      A
AGUCACUUUACAAAAGUGAA^           CAA             C     UUAAUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Cpo-Mir-582-v1_5p*
mirBase accessionMIMAT0047351
Sequence 
0- UUACAGUUGUUCAACCAGUUAC -22
Get sequence
Mature sequence

Cpo-Mir-582-v1_3p
mirBase accessionMIMAT0047352
Sequence 
38- AACCGGUUGAACAACUGAACCC -60
Get sequence