MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-874

Family name MIR-874 (all species)
Seed UGCCCUG
Species Cow (Bos taurus)
MiRBase ID bta-mir-874
Paralogues
Orthologues Cfa-Mir-874  Cja-Mir-874  Cpo-Mir-874  Dno-Mir-874  Eca-Mir-874  Ete-Mir-874  Hsa-Mir-874  Laf-Mir-874  Mml-Mir-874  Mmr-Mir-874  Mmu-Mir-874  Ocu-Mir-874  Pab-Mir-874  Rno-Mir-874 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037334.1: 49091405-49091462 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUCGGAUGAAUUUUUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGACUCACUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCCUUCUGCCCAGGUCACC
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Structure
        10           20        30        40        50        
CCUUCGGAUGAAUUUUU---|  G      CUG   C   A  CA        A  GAGA 
                    GGU UUAGCC   CGG CCC CG  CCAGGGUA GA    C
                    CCG GGUCGG   GCC GGG GC  GGUCCCGU CU    U
CCACUGGACCCGUCUUCCGU^  -      UCA   A   A  CC        C  UCAC 
      110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-874_5p*

mirBase accessionNone
Sequence
0- CGGCCCCACGCACCAGGGUAAGA -23
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Mature sequence

Bta-Mir-874_3p

mirBase accessionMIMAT0009378
Sequence
35- CUGCCCUGGCCCGAGGGACCGAC -58
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Proposed targets TargetScanVert: bta-miR-874