| MirGeneDB ID | Bta-Mir-874 |
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| Family name |
MIR-874 (all species) |
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| Seed |
UGCCCUG |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-874
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| Paralogues |
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| Orthologues |
Cfa-Mir-874
Cpo-Mir-874
Dno-Mir-874
Ete-Mir-874
Hsa-Mir-874
Mml-Mir-874
Mmu-Mir-874
Ocu-Mir-874
Rno-Mir-874
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037334.1: 49091405-49091462 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCUUCGGAUGAAUUUUUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGACUCACUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCCUUCUGCCCAGGUCACC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CCUUCGGAUGAAUUUUU---| G CUG C A CA A GAGA
GGU UUAGCC CGG CCC CG CCAGGGUA GA C
CCG GGUCGG GCC GGG GC GGUCCCGU CU U
CCACUGGACCCGUCUUCCGU^ - UCA A A CC C UCAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Star sequence |
Bta-Mir-874_5p* |
| mirBase accession | None |
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| Sequence |
0- CGGCCCCACGCACCAGGGUAAGA -23
Get sequence
|
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| Mature sequence |
Bta-Mir-874_3p |
| mirBase accession | MIMAT0009378 |
|---|
| Sequence |
35- CUGCCCUGGCCCGAGGGACCGAC -58
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-874
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