MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-874

Family name MIR-874 (all species)
Seed UGCCCUG
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-874
Paralogues
Orthologues Bta-Mir-874  Cfa-Mir-874  Cja-Mir-874  Dno-Mir-874  Eca-Mir-874  Ete-Mir-874  Hsa-Mir-874  Laf-Mir-874  Mml-Mir-874  Mmr-Mir-874  Mmu-Mir-874  Ocu-Mir-874  Pab-Mir-874  Rno-Mir-874 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_17: 26200294-26200351 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CCUUUGGAUGAAUUUUUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGACUCACUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCCUUCUGCCCAGCUCACU
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Structure
        10           20        30        40        50        
CCUUUGGAUGAAUUUUU---|  G      CUG   C   A  CA        A  GAGA 
                    GGU UUAGCC   CGG CCC CG  CCAGGGUA GA    C
                    CCG GGUCGG   GCC GGG GC  GGUCCCGU CU    U
UCACUCGACCCGUCUUCCGU^  -      UCA   A   A  CC        C  UCAC 
      110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-874_5p*
mirBase accessionMIMAT0047393
Sequence 
0- CGGCCCCACGCACCAGGGUAAGA -23
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Mature sequence

Cpo-Mir-874_3p
mirBase accessionMIMAT0047394
Sequence 
35- CUGCCCUGGCCCGAGGGACCGAC -58
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