MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-874

Family name MIR-874 (all species)
Seed UGCCCUG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-874
Paralogues
Orthologues Bta-Mir-874  Cfa-Mir-874  Cja-Mir-874  Cpo-Mir-874  Dno-Mir-874  Eca-Mir-874  Ete-Mir-874  Hsa-Mir-874  Laf-Mir-874  Mml-Mir-874  Mmr-Mir-874  Mmu-Mir-874  Ocu-Mir-874  Pab-Mir-874 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr17: 7025023-7025080 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGGAUGAAUUUUUCUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGACUCGCUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCUUUCUGCCCAGCUUACC
Get precursor sequence
Structure
        10           20        30        40        50        
AUUGGAUGAAUUUUUCU---|  G      CUG   C   A  CA        A  GAGA 
                    GGU UUAGCC   CGG CCC CG  CCAGGGUA GA    C
                    CCG GGUCGG   GCC GGG GC  GGUCCCGU CU    U
CCAUUCGACCCGUCUUUCGU^  -      UCA   A   A  CC        C  UCGC 
      110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-874_5p*
mirBase accessionMIMAT0017290
Sequence 
0- CGGCCCCACGCACCAGGGUAAGA -23
Get sequence
Proposed targets TargetScanVert: rno-miR-874-5p
miRDB: MIMAT0017290
Mature sequence

Rno-Mir-874_3p
mirBase accessionMIMAT0005284
Sequence 
35- CUGCCCUGGCCCGAGGGACCGAC -58
Get sequence
Proposed targets microrna.org: MIMAT0005284
TargetScanVert: rno-miR-874-3p
miRDB: MIMAT0005284