MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-874

Family name MIR-874 (all species)
Seed UGCCCUG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-874
Paralogues
Orthologues Bta-Mir-874  Cfa-Mir-874  Cpo-Mir-874  Dno-Mir-874  Ete-Mir-874  Mml-Mir-874  Mmu-Mir-874  Ocu-Mir-874  Rno-Mir-874 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr5: 137647581-137647640 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAUCGGAUGAAUUGUUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGACUCUCGCUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCCUUCUGCCCAGCUCACC
Get precursor sequence
Structure
        10           20        30        40        50         
CCAUCGGAUGAAUUGUU---|  G      CUG   C   A  CA        A  GAGAC 
                    GGU UUAGCC   CGG CCC CG  CCAGGGUA GA     U
                    CCG GGUCGG   GCC GGG GC  GGUCCCGU CU     C
CCACUCGACCCGUCUUCCGU^  -      UCA   A   A  CC        C  UCGCU 
.       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-874_5p*

mirBase accessionMIMAT0026718
Sequence
0- CGGCCCCACGCACCAGGGUAAGA -23
Get sequence
Proposed targets TargetScanVert: hsa-miR-874-5p
miRDB: MIMAT0026718
Mature sequence

Hsa-Mir-874_3p

mirBase accessionMIMAT0004911
Sequence
37- CUGCCCUGGCCCGAGGGACCGAC -60
Get sequence
Proposed targets microrna.org: MIMAT0004911
TargetScanVert: hsa-miR-874-3p
miRDB: MIMAT0004911