| MirGeneDB ID | Laf-Mir-874 |
|---|---|
| Family name | MIR-874 (all species) |
| Seed | UGCCCUG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-874 Cfa-Mir-874 Cja-Mir-874 Cpo-Mir-874 Dno-Mir-874 Eca-Mir-874 Ete-Mir-874 Hsa-Mir-874 Mml-Mir-874 Mmr-Mir-874 Mmu-Mir-874 Ocu-Mir-874 Pab-Mir-874 Rno-Mir-874 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010028.1: 55052137-55052196 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUUCGGAUGAACUCUUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGACUCUCGCUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCCUUCUGCCCAGCAUACCGet precursor sequence |
| Structure | 10 20 30 40 50 CCUUCGGAUGAACUCUU---| G CUG C A CA A GAGAC GGU UUAGCC CGG CCC CG CCAGGGUA GA U CCG GGUCGG GCC GGG GC GGUCCCGU CU C CCAUACGACCCGUCUUCCGU^ - UCA A A CC C UCGCU . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Laf-Mir-874_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CGGCCCCACGCACCAGGGUAAGA -23
Get sequence
|
| Mature sequence | Laf-Mir-874_3p |
| mirBase accession | None |
| Sequence |
37- CUGCCCUGGCCCGAGGGACCGAC -60
Get sequence
|
