MirGeneDB ID | Mml-Mir-874 |
Family name |
MIR-874 (all species) |
Seed |
UGCCCUG |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-874
|
Paralogues |
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Orthologues |
Bta-Mir-874
Cfa-Mir-874
Cja-Mir-874
Cpo-Mir-874
Dno-Mir-874
Eca-Mir-874
Ete-Mir-874
Hsa-Mir-874
Laf-Mir-874
Mmr-Mir-874
Mmu-Mir-874
Ocu-Mir-874
Pab-Mir-874
Rno-Mir-874
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014341.1: 135041337-135041396 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCUUCGGAUGAAUUGCUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGAGUCUCGCUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCCUCCUGCCCAGCUCACC
Get precursor sequence
|
Structure | 10 20 30 40 50
CCUUCGGAUGAAUUGCU---| G CUG C A CA A GAGAG
GGU UUAGCC CGG CCC CG CCAGGGUA GA U
CCG GGUCGG GCC GGG GC GGUCCCGU CU C
CCACUCGACCCGUCCUCCGU^ - UCA A A CC C UCGCU
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Star sequence |
Mml-Mir-874_5p* |
mirBase accession | MIMAT0026910 |
Sequence |
0- CGGCCCCACGCACCAGGGUAAGA -23
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-874-5p
|
Mature sequence |
Mml-Mir-874_3p |
mirBase accession | MIMAT0006516 |
Sequence |
37- CUGCCCUGGCCCGAGGGACCGAC -60
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-874-3p
|