| MirGeneDB ID | Eca-Mir-874 |
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| Family name |
MIR-874 (all species) |
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| Seed |
UGCCCUG |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-874
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| Paralogues |
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| Orthologues |
Bta-Mir-874
Cfa-Mir-874
Cja-Mir-874
Cpo-Mir-874
Dno-Mir-874
Ete-Mir-874
Hsa-Mir-874
Laf-Mir-874
Mml-Mir-874
Mmr-Mir-874
Mmu-Mir-874
Ocu-Mir-874
Pab-Mir-874
Rno-Mir-874
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009161.1: 38023414-38023473 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCUUCGGAUGAACUUUUGGUGUUAGCCCUGCGGCCCCACGCACCAGGGUAAGAGAGACUCUCGCUUCCUGCCCUGGCCCGAGGGACCGACUGGCUGGGCCUGCCUUCUGCCCAGCUCACC
Get precursor sequence
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| Structure | 10 20 30 40 50
CCUUCGGAUGAACUUUU---| G CUG C A CA A GAGAC
GGU UUAGCC CGG CCC CG CCAGGGUA GA U
CCG GGUCGG GCC GGG GC GGUCCCGU CU C
CCACUCGACCCGUCUUCCGU^ - UCA A A CC C UCGCU
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Star sequence |
Eca-Mir-874_5p* |
| mirBase accession | None |
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| Sequence |
0- CGGCCCCACGCACCAGGGUAAGA -23
Get sequence
|
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| Mature sequence |
Eca-Mir-874_3p |
| mirBase accession | MIMAT0013069 |
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| Sequence |
37- CUGCCCUGGCCCGAGGGACCGAC -60
Get sequence
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