| MirGeneDB ID | Bta-Mir-885 |
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| Family name |
MIR-885 (all species) |
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| Seed |
CCAUUAC |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-885
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| Paralogues |
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| Orthologues |
Cfa-Mir-885
Cja-Mir-885
Dno-Mir-885
Eca-Mir-885
Hsa-Mir-885
Laf-Mir-885
Mml-Mir-885
Mmr-Mir-885
Ocu-Mir-885
Pab-Mir-885
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037349.1: 54438300-54438353 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGCCCCGUCUGCCACGCGGCCCGCGCUCUCUCCAUUACACUACCCUGCCUCUUCUCCACGAGAGGCAGCGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCGGCUCACCUCU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGCCCCGUCUGCCACGC--| C C A - UCU
GGCCCG GCUCU UCCAUUACACU CC CUGCCUCU C
UUGGGC CGAGA AGGUGAUGUGG GG GACGGAGA C
UCUCCACUCGGCCCUGAAC^ A U - C GCA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-885_5p |
| mirBase accession | MIMAT0009382 |
|---|
| Sequence |
0- UCCAUUACACUACCCUGCCUCU -22
Get sequence
|
|---|
| Proposed targets |
TargetScanVert: bta-miR-885
|
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| Star sequence |
Bta-Mir-885_3p* |
| mirBase accession | None |
|---|
| Sequence |
32- AGGCAGCGGGGUGUAGUGGAUA -54
Get sequence
|
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