| MirGeneDB ID | Laf-Mir-885 |
|---|---|
| Family name | MIR-885 (all species) |
| Seed | CCAUUAC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-885 Cfa-Mir-885 Cja-Mir-885 Dno-Mir-885 Eca-Mir-885 Hsa-Mir-885 Mml-Mir-885 Mmr-Mir-885 Ocu-Mir-885 Pab-Mir-885 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010039.1: 36604436-36604489 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCCUGAGCCUACCGCCUGGCCCGCACUCUCUCCAUUACACUACCCUGCCUCUUCUCCACGAGAGGCAGCGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCGGCUCCACCGCGet precursor sequence |
| Structure | 10 20 30 40 50 GCCUGAGCCUACCGCCU--| CA C A - UCU GGCCCG CUCU UCCAUUACACU CC CUGCCUCU C UUGGGC GAGA AGGUGAUGUGG GG GACGGAGA C CGCCACCUCGGCCCUGAAC^ AC U - C GCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14) |
| Mature sequence | Laf-Mir-885_5p |
| mirBase accession | None |
| Sequence |
0- UCCAUUACACUACCCUGCCUCU -22
Get sequence
|
| Star sequence | Laf-Mir-885_3p* (predicted) |
| mirBase accession | None |
| Sequence |
32- AGGCAGCGGGGUGUAGUGGAUA -54
Get sequence
|
