MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-885

Family name MIR-885 (all species)
Seed CCAUUAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-885  Cfa-Mir-885  Cja-Mir-885  Dno-Mir-885  Eca-Mir-885  Hsa-Mir-885  Mml-Mir-885  Mmr-Mir-885  Ocu-Mir-885  Pab-Mir-885 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010039.1: 36604436-36604489 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUGAGCCUACCGCCUGGCCCGCACUCUCUCCAUUACACUACCCUGCCUCUUCUCCACGAGAGGCAGCGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCGGCUCCACCGC
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Structure
        10          20        30        40         50      
GCCUGAGCCUACCGCCU--|     CA    C           A  -        UCU 
                   GGCCCG  CUCU UCCAUUACACU CC CUGCCUCU   C
                   UUGGGC  GAGA AGGUGAUGUGG GG GACGGAGA   C
CGCCACCUCGGCCCUGAAC^     AC    U           -  C        GCA 
  110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-885_5p
mirBase accessionNone
Sequence 
0- UCCAUUACACUACCCUGCCUCU -22
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Star sequence

Laf-Mir-885_3p* (predicted)
mirBase accessionNone
Sequence 
32- AGGCAGCGGGGUGUAGUGGAUA -54
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