MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-885

Family name MIR-885 (all species)
Seed CCAUUAC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-885
Paralogues
Orthologues Bta-Mir-885  Cfa-Mir-885  Cpo-Mir-885  Hsa-Mir-885  Mml-Mir-885  Ocu-Mir-885 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH570235: 996212-996265 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCCAAGGCUGCCGCUCGGCCCACACUCUCUCCAUUACACUACCCUGCCUCUUCUCCACGAGAGGCAGCUGGGUGUAGCGGAUAGAGCACGGGUUCAAGUCCCAGCUCCACCGC
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Structure
        10          20        30        40        50      
GCCCAAGGCUGCCGCUC--|    ACA    C   A       ACC        UCU 
                   GGCCC   CUCU UCC UUACACU   CUGCCUCU   C
                   UUGGG   GAGA AGG GAUGUGG   GACGGAGA   C
CGCCACCUCGACCCUGAAC^    CAC    U   C       GUC        GCA 
  110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Dno-Mir-885_5p

mirBase accessionMIMAT0048020
Sequence
0- UCCAUUACACUACCCUGCCUCU -22
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Star sequence

Dno-Mir-885_3p* (predicted)

mirBase accessionMIMAT0048021
Sequence
32- AGGCAGCUGGGUGUAGCGGAUA -54
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