| MirGeneDB ID | Cja-Mir-885 |
|---|---|
| Family name | MIR-885 (all species) |
| Seed | CCAUUAC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-885 Cfa-Mir-885 Dno-Mir-885 Eca-Mir-885 Hsa-Mir-885 Laf-Mir-885 Mml-Mir-885 Mmr-Mir-885 Ocu-Mir-885 Pab-Mir-885 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021929.1: 61504170-61504223 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCCCAGUCUGCUACUCGGCCCGCACUCUCUCCAUUACACUACCCUGCCUCUUCUCCAUGAGAGGCAGUGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCAGCUCCACCACGet precursor sequence |
| Structure | 10 20 30 40 50 GGCCCAGUCUGCUACUC--| CA C A - UCU GGCCCG CUCU UCCAUUACACU CC CUGCCUCU C UUGGGC GAGA AGGUGAUGUGG GG GACGGAGA C CACCACCUCGACCCUGAAC^ AC U - U GUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-885_5p |
| mirBase accession | None |
| Sequence |
0- UCCAUUACACUACCCUGCCUCU -22
Get sequence
|
| Star sequence | Cja-Mir-885_3p* (predicted) |
| mirBase accession | None |
| Sequence |
32- AGGCAGUGGGGUGUAGUGGAUA -54
Get sequence
|
