MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-885

Family name MIR-885 (all species)
Seed CCAUUAC
Species Horse (Equus caballus)
MiRBase ID eca-mir-885
Paralogues
Orthologues Bta-Mir-885  Cfa-Mir-885  Cja-Mir-885  Dno-Mir-885  Hsa-Mir-885  Laf-Mir-885  Mml-Mir-885  Mmr-Mir-885  Ocu-Mir-885  Pab-Mir-885 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009163.1: 8057798-8057851 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCCAGUCUGCCGCUCGGCCCGCGCUCUCUCCAUUACACUACCCUGCCUCUUCUCCAUGAGAGGCAGCGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCGGCUCCACCAC
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Structure
        10          20        30        40         50      
GGCCCAGUCUGCCGCUC--|     C     C           A  -        UCU 
                   GGCCCG GCUCU UCCAUUACACU CC CUGCCUCU   C
                   UUGGGC CGAGA AGGUGAUGUGG GG GACGGAGA   C
CACCACCUCGGCCCUGAAC^     A     U           -  C        GUA 
  110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-885_5p
mirBase accessionMIMAT0013081
Sequence 
0- UCCAUUACACUACCCUGCCUCU -22
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Star sequence

Eca-Mir-885_3p*
mirBase accessionMIMAT0013082
Sequence 
32- AGGCAGCGGGGUGUAGUGGAUA -54
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