| MirGeneDB ID | Pab-Mir-885 |
|---|---|
| Family name | MIR-885 (all species) |
| Seed | GGCAGCG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-885 Cfa-Mir-885 Cja-Mir-885 Dno-Mir-885 Eca-Mir-885 Hsa-Mir-885 Laf-Mir-885 Mml-Mir-885 Mmr-Mir-885 Ocu-Mir-885 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM068843.1: 68359523-68359576 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCCCAGUCUGCUACUCGGCCCGCACUCUCUCCAUUACACUACCCUGCCUCUUCUCCAUGAGAGGCAGCGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCGGCUCCACCACGet precursor sequence |
| Structure | 10 20 30 40 50 GGCCCAGUCUGCUACUC--| CA C A - UCU GGCCCG CUCU UCCAUUACACU CC CUGCCUCU C UUGGGC GAGA AGGUGAUGUGG GG GACGGAGA C CACCACCUCGGCCCUGAAC^ AC U - C GUA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Pab-Mir-885_5p* |
| mirBase accession | None |
| Sequence |
0- UCCAUUACACUACCCUGCCUCU -22
Get sequence
|
| Mature sequence | Pab-Mir-885_3p |
| mirBase accession | None |
| Sequence |
32- AGGCAGCGGGGUGUAGUGGAUA -54
Get sequence
|
