MirGeneDB ID | Mml-Mir-885 |
Family name |
MIR-885 (all species) |
Seed |
CCAUUAC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-885
|
Paralogues |
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Orthologues |
Bta-Mir-885
Cfa-Mir-885
Cja-Mir-885
Dno-Mir-885
Eca-Mir-885
Hsa-Mir-885
Laf-Mir-885
Mmr-Mir-885
Ocu-Mir-885
Pab-Mir-885
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014337.1: 141805001-141805054 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGCCCAGUAUGCUACUCGGCCCGCACUCUCUCCAUUACACUACCCUGCCUCUUCUCCAUGAGAGGCAGCGGGGUGUAGUGGAUAGAGCACGGGUUCAAGUCCCGGCUCCACCAC
Get precursor sequence
|
Structure | 10 20 30 40 50
GGCCCAGUAUGCUACUC--| CA C A - UCU
GGCCCG CUCU UCCAUUACACU CC CUGCCUCU C
UUGGGC GAGA AGGUGAUGUGG GG GACGGAGA C
CACCACCUCGGCCCUGAAC^ AC U - C GUA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-885_5p |
mirBase accession | MIMAT0006522 |
Sequence |
0- UCCAUUACACUACCCUGCCUCU -22
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-885-5p
|
Star sequence |
Mml-Mir-885_3p* |
mirBase accession | MIMAT0006523 |
Sequence |
32- AGGCAGCGGGGUGUAGUGGAUA -54
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-885-3p
|