MirGeneDB 3.0

MirGeneDB ID

Cfa-Mir-151

Family name MIR-151 (all species)
Seed CGAGGAG
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-151
Paralogues
Orthologues Bta-Mir-151  Cja-Mir-151  Cpo-Mir-151  Dno-Mir-151  Eca-Mir-151  Ete-Mir-151  Hsa-Mir-151  Laf-Mir-151  Mml-Mir-151  Mmr-Mir-151  Mmu-Mir-151  Ocu-Mir-151  Pab-Mir-151  Rno-Mir-151 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)
chr13: 35353689-35353744 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCAAGAGGACUACAGCACCUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAGCCCUACUAGACUGAGGCUCCUUGAGGGCAGGGAUCGUCAUACUCGCCUCAGUGCUG
Get precursor sequence
Structure
        10          20        30        40        50        
GGCAAGAGGACUACAGC--| CU                   CA          UGUCU 
                   AC  UUCCUGCCCUCGAGGAGCU  CAGUCUAGUA     \
                   UG  AGGGACGGGAGUUCCUCGG  GUCAGAUCAU     C
GUCGUGACUCCGCUCAUAC^ CU                   A-          CCCGA 
    110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-151_5p

mirBase accessionMIMAT0006615
Sequence
0- UCGAGGAGCUCACAGUCUAGUA -22
Get sequence
Proposed targets TargetScanVert: cfa-miR-151
miRDB: MIMAT0006615
Co-mature sequence

Cfa-Mir-151_3p

mirBase accessionNone
Sequence
35- CUAGACUGAGGCUCCUUGAGG -56
Get sequence