MirGeneDB 3.0

MirGeneDB ID

Cpo-Mir-151

Family name MIR-151 (all species)
Seed UAGACUG
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-151
Paralogues
Orthologues Bta-Mir-151  Cfa-Mir-151  Cja-Mir-151  Dno-Mir-151  Eca-Mir-151  Ete-Mir-151  Hsa-Mir-151  Laf-Mir-151  Mml-Mir-151  Mmr-Mir-151  Mmu-Mir-151  Ocu-Mir-151  Pab-Mir-151  Rno-Mir-151 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)
scaffold_17: 36727980-36728035 [+] UCSC
Precursor
(pre-Mir +30nt flank)
ACACAGAUGACCGAAGCACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCUAUCCUACUAGACUGAGGCUCCUUGAGGACAGGGAUCGUCAUACUCACCUCGGUGUUG
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Structure
        10          20        30        40        50        
ACACAGAUGACCGAAGC--| UU      C            CA          UGUCU 
                   AC  UUCCUG CCUCGAGGAGCU  CAGUCUAGUA     \
                   UG  AGGGAC GGAGUUCCUCGG  GUCAGAUCAU     C
GUUGUGGCUCCACUCAUAC^ CU      A            A-          CCUAU 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-151_5p*

mirBase accessionMIMAT0047030
Sequence
0- UCGAGGAGCUCACAGUCUAGUA -22
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Mature sequence

Cpo-Mir-151_3p

mirBase accessionMIMAT0047031
Sequence
35- CUAGACUGAGGCUCCUUGAGG -56
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