| MirGeneDB ID | Cpo-Mir-151 |
|---|
| Family name |
MIR-151 (all species) |
|---|
| Seed |
UAGACUG |
|---|
| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-151
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-151
Cfa-Mir-151
Cja-Mir-151
Dno-Mir-151
Eca-Mir-151
Ete-Mir-151
Hsa-Mir-151
Laf-Mir-151
Mml-Mir-151
Mmr-Mir-151
Mmu-Mir-151
Ocu-Mir-151
Pab-Mir-151
Rno-Mir-151
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(cavPor3) |
scaffold_17: 36727980-36728035 [+]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACACAGAUGACCGAAGCACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCUAUCCUACUAGACUGAGGCUCCUUGAGGACAGGGAUCGUCAUACUCACCUCGGUGUUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACACAGAUGACCGAAGC--| UU C CA UGUCU
AC UUCCUG CCUCGAGGAGCU CAGUCUAGUA \
UG AGGGAC GGAGUUCCUCGG GUCAGAUCAU C
GUUGUGGCUCCACUCAUAC^ CU A A- CCUAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
To |
| |
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| Star sequence |
Cpo-Mir-151_5p* |
| mirBase accession | MIMAT0047030 |
|---|
| Sequence |
0- UCGAGGAGCUCACAGUCUAGUA -22
Get sequence
|
|---|
| Mature sequence |
Cpo-Mir-151_3p |
| mirBase accession | MIMAT0047031 |
|---|
| Sequence |
35- CUAGACUGAGGCUCCUUGAGG -56
Get sequence
|
|---|
