MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-151

Family name MIR-151 (all species)
Seed CGAGGAG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-151  Cfa-Mir-151  Cja-Mir-151  Cpo-Mir-151  Dno-Mir-151  Eca-Mir-151  Ete-Mir-151  Hsa-Mir-151  Mml-Mir-151  Mmr-Mir-151  Mmu-Mir-151  Ocu-Mir-151  Pab-Mir-151  Rno-Mir-151 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010035.1: 84809316-84809372 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAAAGAUGACUGAGACACUCUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUGCCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGGUCGUCACACUCACCUCCGUGUCG
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Structure
        10          20        30        40        50        
GCAAAGAUGACUGAGAC--| UC      C            CA          UGUGC 
                   AC  UUCCUG CCUCGAGGAGCU  CAGUCUAGUA     C
                   UG  GGGGAC GGAGUUCCUCGA  GUCAGAUCAU     A
GCUGUGCCUCCACUCACAC^ CU      A            A-          CCCCU 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Wh
Mature sequence

Laf-Mir-151_5p

mirBase accessionNone
Sequence
0- UCGAGGAGCUCACAGUCUAGUA -22
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Star sequence

Laf-Mir-151_3p*

mirBase accessionNone
Sequence
36- CUAGACUGAAGCUCCUUGAGG -57
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