| MirGeneDB ID | Eca-Mir-151 |
|---|
| Family name |
MIR-151 (all species) |
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| Seed |
CGAGGAG |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-151
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| Paralogues |
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| Orthologues |
Bta-Mir-151
Cfa-Mir-151
Cja-Mir-151
Cpo-Mir-151
Dno-Mir-151
Ete-Mir-151
Hsa-Mir-151
Laf-Mir-151
Mml-Mir-151
Mmr-Mir-151
Mmu-Mir-151
Ocu-Mir-151
Pab-Mir-151
Rno-Mir-151
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009156.1: 81983424-81983480 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGGCGUGAUGACCAAACACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGAUCGUCAUACUCUCCUCGGUGUUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGCGUGAUGACCAAAC--| UU C CA UGUCU
AC UUCCUG CCUCGAGGAGCU CAGUCUAGUA C
UG AGGGAC GGAGUUCCUCGA GUCAGAUCAU A
GUUGUGGCUCCUCUCAUAC^ CU A A- CCCCU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
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| Mature sequence |
Eca-Mir-151_5p |
| mirBase accession | MIMAT0013004 |
|---|
| Sequence |
0- UCGAGGAGCUCACAGUCUAGUA -22
Get sequence
|
|---|
| Co-mature sequence |
Eca-Mir-151_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CUAGACUGAAGCUCCUUGAGG -57
Get sequence
|
|---|
