MirGeneDB ID | Eca-Mir-151 |
Family name |
MIR-151 (all species) |
Seed |
CGAGGAG |
Species |
Horse (Equus caballus) |
MiRBase ID |
eca-mir-151
|
Paralogues |
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Orthologues |
Bta-Mir-151
Cfa-Mir-151
Cja-Mir-151
Cpo-Mir-151
Dno-Mir-151
Ete-Mir-151
Hsa-Mir-151
Laf-Mir-151
Mml-Mir-151
Mmr-Mir-151
Mmu-Mir-151
Ocu-Mir-151
Pab-Mir-151
Rno-Mir-151
|
Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCA_002863925.1_EquCab3.0) |
CM009156.1: 81983424-81983480 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
GGGCGUGAUGACCAAACACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGAUCGUCAUACUCUCCUCGGUGUUG
Get precursor sequence
|
Structure | 10 20 30 40 50
GGGCGUGAUGACCAAAC--| UU C CA UGUCU
AC UUCCUG CCUCGAGGAGCU CAGUCUAGUA C
UG AGGGAC GGAGUUCCUCGA GUCAGAUCAU A
GUUGUGGCUCCUCUCAUAC^ CU A A- CCCCU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
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Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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Mature sequence |
Eca-Mir-151_5p |
mirBase accession | MIMAT0013004 |
Sequence |
0- UCGAGGAGCUCACAGUCUAGUA -22
Get sequence
|
Co-mature sequence |
Eca-Mir-151_3p |
mirBase accession | None |
Sequence |
36- CUAGACUGAAGCUCCUUGAGG -57
Get sequence
|