MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-151

Family name MIR-151 (all species)
Seed CGAGGAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-151
Paralogues
Orthologues Bta-Mir-151  Cfa-Mir-151  Cja-Mir-151  Cpo-Mir-151  Dno-Mir-151  Eca-Mir-151  Ete-Mir-151  Hsa-Mir-151  Laf-Mir-151  Mml-Mir-151  Mmr-Mir-151  Mmu-Mir-151  Pab-Mir-151  Rno-Mir-151 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)
chrUn0252: 213334-213390 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAAAGACGCCUGAGCCACUGUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGAUCGUCCUCCUCACCUCAGUGCUG
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Structure
        10          20        30        40        50        
ACAAAGACGCCUGAGCC--| U       C            CA          UGUCU 
                   AC GUUCCUG CCUCGAGGAGCU  CAGUCUAGUA     C
                   UG UAGGGAC GGAGUUCCUCGA  GUCAGAUCAU     A
GUCGUGACUCCACUCCUCC^ C       A            A-          CCCCU 
     110       100        90        80         70        60
Deep sequencing
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CommentThe highest expression of the 3p arm has a 1 nt addition of an "A." However when seen the 3' offset reads suggests that this is the correct Drosha cut.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-151_5p

mirBase accessionMIMAT0048265
Sequence
0- UCGAGGAGCUCACAGUCUAGUA -22
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Star sequence

Ocu-Mir-151_3p*

mirBase accessionMIMAT0048266
Sequence
36- CUAGACUGAAGCUCCUUGAGG -57
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