MirGeneDB ID | Pab-Mir-151 |
Family name |
MIR-151 (all species) |
Seed |
CGAGGAG |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-151
Cfa-Mir-151
Cja-Mir-151
Cpo-Mir-151
Dno-Mir-151
Eca-Mir-151
Ete-Mir-151
Hsa-Mir-151
Laf-Mir-151
Mml-Mir-151
Mmr-Mir-151
Mmu-Mir-151
Ocu-Mir-151
Rno-Mir-151
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054686.2: 157150103-157150159 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GCAAAGAUGACUAAAACACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGAUGGUCAUACUCACCUUGGUGUUG
Get precursor sequence
|
Structure | 10 20 30 40 50
GCAAAGAUGACUAAAAC--| U C CA UGUCU
ACU UUCCUG CCUCGAGGAGCU CAGUCUAGUA C
UGG AGGGAC GGAGUUCCUCGA GUCAGAUCAU A
GUUGUGGUUCCACUCAUAC^ U A A- CCCCU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Pab-Mir-151_5p |
mirBase accession | None |
Sequence |
0- UCGAGGAGCUCACAGUCUAGUA -22
Get sequence
|
Co-mature sequence |
Pab-Mir-151_3p |
mirBase accession | None |
Sequence |
36- CUAGACUGAAGCUCCUUGAGG -57
Get sequence
|