MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-151

Family name MIR-151 (all species)
Seed CGAGGAG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-151  Cfa-Mir-151  Cja-Mir-151  Cpo-Mir-151  Dno-Mir-151  Eca-Mir-151  Ete-Mir-151  Hsa-Mir-151  Laf-Mir-151  Mml-Mir-151  Mmr-Mir-151  Mmu-Mir-151  Ocu-Mir-151  Rno-Mir-151 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054686.2: 157150103-157150159 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAAAGAUGACUAAAACACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGAUGGUCAUACUCACCUUGGUGUUG
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Structure
        10          20        30        40        50        
GCAAAGAUGACUAAAAC--|  U      C            CA          UGUCU 
                   ACU UUCCUG CCUCGAGGAGCU  CAGUCUAGUA     C
                   UGG AGGGAC GGAGUUCCUCGA  GUCAGAUCAU     A
GUUGUGGUUCCACUCAUAC^  U      A            A-          CCCCU 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Br Br Li Li
Mature sequence

Pab-Mir-151_5p

mirBase accessionNone
Sequence
0- UCGAGGAGCUCACAGUCUAGUA -22
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Co-mature sequence

Pab-Mir-151_3p

mirBase accessionNone
Sequence
36- CUAGACUGAAGCUCCUUGAGG -57
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