MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-544-P2

Family name MIR-544 (all species)
Seed CUUGUUA
Species Dog (Canis familiaris)
MiRBase ID
Paralogues Cfa-Mir-544-P1 
Orthologues Bta-Mir-544  Cja-Mir-544  Dno-Mir-544  Eca-Mir-544  Ete-Mir-544  Hsa-Mir-544  Laf-Mir-544  Mml-Mir-544  Mmr-Mir-544  Mmu-Mir-544  Ocu-Mir-544  Pab-Mir-544  Rno-Mir-544 
Node of Origin (locus) C. familiaris
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr12: 49638411-49638468 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCUUGAUGUCCCUAUGAAUCACUGGAGAUCUUGUUAAGAUGCAGAUUCUGGUUCAUGGCCUAGGAUUCUGCAUUUGUAACAAGCUCCCAGGUGAUGCCAAUGCUGCCAUCCACAGA
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Structure
        10          20         30         40        50        
AGGCUUGAUGUCCCUAUGA--    -|   A  U       -         U   GGUUCA 
                     AUCA CUGG GA CUUGUUA AGAUGCAGA UCU      \
                     UAGU GACC CU GAACAAU UUUACGUCU AGG      U
AGACACCUACCGUCGUAACCG    G^   -  C       G         U   AUCCGG 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-544-P2_5p
mirBase accessionNone
Sequence 
0- UCUUGUUAAGAUGCAGAUUCU -21
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Co-mature sequence

Cfa-Mir-544-P2_3p
mirBase accessionNone
Sequence 
36- AUUCUGCAUUUGUAACAAGCUC -58
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