| MirGeneDB ID | Laf-Mir-544 |
|---|---|
| Family name | MIR-544 (all species) |
| Seed | CUUGUUA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-544 Cfa-Mir-544-P1 Cfa-Mir-544-P2 Cja-Mir-544 Dno-Mir-544 Eca-Mir-544 Ete-Mir-544 Hsa-Mir-544 Mml-Mir-544 Mmr-Mir-544 Mmu-Mir-544 Ocu-Mir-544 Pab-Mir-544 Rno-Mir-544 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010036.1: 75535725-75535783 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAUGCUUCUAAGAUUUUAAUCACCUAGGGAUCUUGUUAAAAUGCAGAUUCUGAUUCAUGGGCCUGAGAUUCUGCAUUUUUAGCAAGCUCCCAAGUGAUGCCGUUGCUGCUGGUCUGCGGGet precursor sequence |
| Structure | 10 20 30 40 50 AAUGCUUCUAAGAUUUUA---| CUA U - U GAUUCA AUCAC GGGA CUUGUUAAAA UGCAGA UCU U UAGUG CCCU GAACGAUUUU ACGUCU AGA G GGCGUCUGGUCGUCGUUGCCG^ AA- C U U GUCCGG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-544_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UCUUGUUAAAAUGCAGAUUCUGA -23
Get sequence
|
| Star sequence | Laf-Mir-544_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- AUUCUGCAUUUUUAGCAAGCUC -59
Get sequence
|
