MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-544

Family name MIR-544 (all species)
Seed CUUGUUA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-544  Cfa-Mir-544-P1  Cfa-Mir-544-P2  Cja-Mir-544  Dno-Mir-544  Eca-Mir-544  Ete-Mir-544  Hsa-Mir-544  Mml-Mir-544  Mmr-Mir-544  Mmu-Mir-544  Ocu-Mir-544  Pab-Mir-544  Rno-Mir-544 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75535725-75535783 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGCUUCUAAGAUUUUAAUCACCUAGGGAUCUUGUUAAAAUGCAGAUUCUGAUUCAUGGGCCUGAGAUUCUGCAUUUUUAGCAAGCUCCCAAGUGAUGCCGUUGCUGCUGGUCUGCGG
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Structure
        10           20        30        40         50        
AAUGCUUCUAAGAUUUUA---|    CUA    U          -      U   GAUUCA 
                     AUCAC   GGGA CUUGUUAAAA UGCAGA UCU      U
                     UAGUG   CCCU GAACGAUUUU ACGUCU AGA      G
GGCGUCUGGUCGUCGUUGCCG^    AA-    C          U      U   GUCCGG 
       110       100         90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-544_5p (predicted)
mirBase accessionNone
Sequence 
0- UCUUGUUAAAAUGCAGAUUCUGA -23
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Star sequence

Laf-Mir-544_3p* (predicted)
mirBase accessionNone
Sequence 
37- AUUCUGCAUUUUUAGCAAGCUC -59
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