MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-544

Family name MIR-544 (all species)
Seed CUUGUUA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-544  Cfa-Mir-544-P1  Cfa-Mir-544-P2  Cja-Mir-544  Dno-Mir-544  Eca-Mir-544  Ete-Mir-544  Hsa-Mir-544  Laf-Mir-544  Mml-Mir-544  Mmu-Mir-544  Ocu-Mir-544  Pab-Mir-544  Rno-Mir-544 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007663.1: 12742576-12742632 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-544)		 Mir-154-P2-v2 CM007663.1: 12719569-12719626 [+] UCSC Ensembl
Mir-154-P2-v1 CM007663.1: 12719570-12719625 [+] UCSC Ensembl
Mir-154-P37 CM007663.1: 12721366-12721423 [+] UCSC Ensembl
Mir-154-P17 CM007663.1: 12739835-12739897 [+] UCSC Ensembl
Mir-154-P22 CM007663.1: 12745610-12745663 [+] UCSC Ensembl
Mir-154-P30 CM007663.1: 12759249-12759302 [+] UCSC Ensembl
Mir-154-P33 CM007663.1: 12759838-12759893 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGCUUCUAAGAUGUUCAUCACCUAGGGAUCUUGUUAAAAAGCAGAUUCUGAUUCAGGGACCAAGAUUCUGCAUUUUUAGCAAGUUCUCAAGUGAUGCUAACGCUGCUGGUCUGUG
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Structure
        10          20        30        40         50        
AAUGCUUCUAAGAUGUU--|     CUA    U           -     U   GAUUCA 
                   CAUCAC   GGGA CUUGUUAAAAA GCAGA UCU      \
                   GUAGUG   CUCU GAACGAUUUUU CGUCU AGA      G
GUGUCUGGUCGUCGCAAUC^     AA-    U           A     U   ACCAGG 
     110       100         90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Mi Mi Mi Mi Mi Mi Mi Mi
Mature sequence

Mmr-Mir-544_5p (predicted)
mirBase accessionNone
Sequence 
0- UCUUGUUAAAAAGCAGAUUCU -21
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Co-mature sequence

Mmr-Mir-544_3p (predicted)
mirBase accessionNone
Sequence 
36- AUUCUGCAUUUUUAGCAAGUU -57
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