MirGeneDB ID | Dno-Mir-544 |
Family name |
MIR-544 (all species) |
Seed |
CUUGUUA |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-544
Cfa-Mir-544-P1
Cfa-Mir-544-P2
Cja-Mir-544
Eca-Mir-544
Ete-Mir-544
Hsa-Mir-544
Laf-Mir-544
Mml-Mir-544
Mmr-Mir-544
Mmu-Mir-544
Ocu-Mir-544
Pab-Mir-544
Rno-Mir-544
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH568269: 667114-667184 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAUUUUAUGUGUUCAAGAAUUAUUUGGGAAUCUUGUUAAAAUGCAGAUUCUGAUUCAGUAGGUUUGGGGCAGGGCCUGAGAUUCUGCAUUUUGAGCAAGCUUCUGGUGAUGCUGAUGCUGUUUCCAAGAGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GAUUUUAUGUGUUCAAGA---| UG U - U GAUUCAGUAGGUU
AUUAUU GGAA CUUG UUAAAAUGCAGA UCU \
UAGUGG UCUU GAAC AGUUUUACGUCU AGA U
CGAGAACCUUUGUCGUAGUCG^ -- C G U GUCCGGGACGGGG
. 120 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dno-Mir-544_5p (predicted) |
mirBase accession | None |
Sequence |
0- UCUUGUUAAAAUGCAGAUUCUGA -23
Get sequence
|
Star sequence |
Dno-Mir-544_3p* (predicted) |
mirBase accession | None |
Sequence |
50- AUUCUGCAUUUUGAGCAAGCU -71
Get sequence
|