MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-544

Family name MIR-544 (all species)
Seed CUUGUUA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-544  Cfa-Mir-544-P1  Cfa-Mir-544-P2  Cja-Mir-544  Eca-Mir-544  Ete-Mir-544  Hsa-Mir-544  Laf-Mir-544  Mml-Mir-544  Mmr-Mir-544  Mmu-Mir-544  Ocu-Mir-544  Pab-Mir-544  Rno-Mir-544 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH568269: 667114-667184 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAUUUUAUGUGUUCAAGAAUUAUUUGGGAAUCUUGUUAAAAUGCAGAUUCUGAUUCAGUAGGUUUGGGGCAGGGCCUGAGAUUCUGCAUUUUGAGCAAGCUUCUGGUGAUGCUGAUGCUGUUUCCAAGAGC
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Structure
        10           20        30         40        50        60     
GAUUUUAUGUGUUCAAGA---|     UG    U    -            U   GAUUCAGUAGGUU 
                     AUUAUU  GGAA CUUG UUAAAAUGCAGA UCU             \
                     UAGUGG  UCUU GAAC AGUUUUACGUCU AGA             U
CGAGAACCUUUGUCGUAGUCG^     --    C    G            U   GUCCGGGACGGGG 
 .       120       110         100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Dno-Mir-544_5p (predicted)

mirBase accessionNone
Sequence
0- UCUUGUUAAAAUGCAGAUUCUGA -23
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Star sequence

Dno-Mir-544_3p* (predicted)

mirBase accessionNone
Sequence
50- AUUCUGCAUUUUGAGCAAGCU -71
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