MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-197

Family name MIR-197 (all species)
Seed GGGUAGA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-197  Cfa-Mir-197  Cpo-Mir-197  Dno-Mir-197  Eca-Mir-197  Hsa-Mir-197  Laf-Mir-197  Mml-Mir-197  Mmr-Mir-197  Ocu-Mir-197  Pab-Mir-197 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021921.1: 144773041-144773101 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCUGGAAUCUGUGCUCCGGGGGCUGUGCCGGGUAGAGAGGGCAGUGGGAGGUAAGAGCUCUUCACCCUUCACCACCUUCUCCACCCAGCAUGGCCGGCACACUUUGGUCUACAGCACAU
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Structure
        10        20          30        40        50          
CUGCUGGAAUCUGUGCUCCGGG--|       C    A       CA    GA  UAAGAG 
                        GGCUGUGC GGGU GAGAGGG  GUGG  GG      \
                        CCGGUACG CCCA CUCUUCC  CACU  CC      C
UACACGACAUCUGGUUUCACACGG^       A    C       AC    UC  ACUUCU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Cja-Mir-197_5p
mirBase accessionNone
Sequence 
0- CGGGUAGAGAGGGCAGUGGGAGG -23
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Co-mature sequence

Cja-Mir-197_3p
mirBase accessionNone
Sequence 
39- UUCACCACCUUCUCCACCCAGC -61
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