| MirGeneDB ID | Ocu-Mir-197 |
|---|
| Family name |
MIR-197 (all species) |
|---|
| Seed |
UCACCAC |
|---|
| Species |
Rabbit (Oryctolagus cuniculus) |
|---|
| MiRBase ID |
ocu-mir-197
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-197
Cfa-Mir-197
Cpo-Mir-197
Dno-Mir-197
Hsa-Mir-197
Mml-Mir-197
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(oryCun2_add) |
chr13: 54594236-54594296 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CUGCGAGAAUCUGUGCUCCAGGGGCUGUGCUGGGUAGAGAGGGUAGUGGGAGGUAAGAGCUCUUCACCCUUCACCACCUUCUCCACCCAGCGUGGCCAGCACACUUUGGUCUACGGCAUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUGCGAGAAUCUGUGCUCCAGG--| UG A A GA UAAGAG
GGC UGCUGGGU GAGAGGGU GUGG GG \
CCG GCGACCCA CUCUUCCA CACU CC C
UCUACGGCAUCUGGUUUCACACGA^ GU C C UC ACUUCU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ocu-Mir-197_5p* (predicted) |
| mirBase accession | MIMAT0048317 |
|---|
| Sequence |
0- UGGGUAGAGAGGGUAGUGGGAGG -23
Get sequence
|
|---|
| Mature sequence |
Ocu-Mir-197_3p |
| mirBase accession | MIMAT0048318 |
|---|
| Sequence |
39- UUCACCACCUUCUCCACCCAGC -61
Get sequence
|
|---|
