MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-197

Family name MIR-197 (all species)
Seed UCACCAC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-197
Paralogues
Orthologues Bta-Mir-197  Cfa-Mir-197  Cja-Mir-197  Dno-Mir-197  Eca-Mir-197  Hsa-Mir-197  Laf-Mir-197  Mml-Mir-197  Mmr-Mir-197  Ocu-Mir-197  Pab-Mir-197 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_2: 33750403-33750463 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CUGCUGGAAUCUGUGCUCCGGGGGCUGUGCCGGGUAGAGAGGGCAGUGGGAGGUAAGAGCUCUUCACCCUUCACCACCUUCUCCACCCAGCAUGGCCAGCACACUUUGGUCUACGGCAUAU
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Structure
        10        20          30        40        50          
CUGCUGGAAUCUGUGCUCCGGG--|       C    A       CA    GA  UAAGAG 
                        GGCUGUGC GGGU GAGAGGG  GUGG  GG      \
                        CCGGUACG CCCA CUCUUCC  CACU  CC      C
UAUACGGCAUCUGGUUUCACACGA^       A    C       AC    UC  ACUUCU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-197_5p*
mirBase accessionMIMAT0047084
Sequence 
0- CGGGUAGAGAGGGCAGUGGGAGG -23
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Mature sequence

Cpo-Mir-197_3p
mirBase accessionMIMAT0047085
Sequence 
39- UUCACCACCUUCUCCACCCAGC -61
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