MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-670

Family name MIR-670 (all species)
Seed UUCCUCA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-670  Cpo-Mir-670  Dno-Mir-670  Eca-Mir-670  Hsa-Mir-670  Laf-Mir-670  Mml-Mir-670  Mmr-Mir-670  Mmu-Mir-670  Ocu-Mir-670  Pab-Mir-670  Rno-Mir-670 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021925.1: 105342742-105342805 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUUCAUCCAGUUUAGGGGUGAACCUGAUGUCCCUGAGUGUAUGUGGCGAACCUGGAUUUGCCUUGGGUUUCCUCAUACUCAUUCAGGAGUGUCAGUUGCCCCUUCAUGCGACGUUGGAGAGC
Get precursor sequence
Structure
        10            20        30        40          50        60 
UGCUUCAUCCAGUUUAG----|  UG AC      UC       --     U  C      GGAUU 
                     GGG  A  CUGAUG  CCUGAGU  GUAUG GG GAACCU     \
                     CCC  U  GACUGU  GGACUUA  CAUAC CC UUUGGG     U
CGAGAGGUUGCAGCGUACUUC^  GU --      GA       CU     U  -      UUCCG 
  120       110       100          90        80         70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cja-Mir-670_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUCCCUGAGUGUAUGUGGCGAACCU -25
Get sequence
Mature sequence

Cja-Mir-670_3p (predicted)
mirBase accessionNone
Sequence 
39- UUUCCUCAUACUCAUUCAGGAGUGU -64
Get sequence