| MirGeneDB ID | Rno-Mir-670 |
|---|
| Family name |
MIR-670 (all species) |
|---|
| Seed |
UUCCUCA |
|---|
| Species |
Norway rat (Rattus norvegicus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-670
Cja-Mir-670
Cpo-Mir-670
Dno-Mir-670
Eca-Mir-670
Hsa-Mir-670
Laf-Mir-670
Mml-Mir-670
Mmr-Mir-670
Mmu-Mir-670
Ocu-Mir-670
Pab-Mir-670
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(rn6) |
chr3: 83158232-83158294 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUGUUACACGUGGUUGGAGGUGGGCCUGACAUCCUGAGUGUGUGUGGUGAACCUGAACUUGCCCUGGGUUUCCUCAGAUACAUUCAGGAGUGUCAGCUGCCUCUUCACUCAAUGGAGAAAGUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUGUUACACGUGGUUGG----| UG GC - G - UG UGAACU
AGG G CUGACA UCCUGAGUGUGU UG G AACC \
UCC C GACUGU AGGACUUACAUA AC C UUGG U
GUGAAAGAGGUAACUCACUUC^ GU -- G G U CU GUCCCG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Dr |
Dr |
Ad |
Bi |
Bi |
Bi |
Bi |
Br |
Br |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Co |
Co |
Co |
Co |
Du |
Du |
Du |
Du |
Fa |
He |
He |
He |
Hi |
Hi |
Il |
Il |
Je |
Je |
Ki |
Ki |
Ki |
Ki |
Ki |
La |
Li |
Li |
Li |
Li |
Li |
Li |
Lu |
Me |
Me |
Mu |
Ov |
Pa |
Pa |
Pa |
Sk |
Sm |
So |
So |
So |
So |
Sp |
St |
St |
St |
St |
Te |
Te |
Th |
Ut |
Wh |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Rno-Mir-670_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AUCCUGAGUGUGUGUGGUGAACC -23
Get sequence
|
|---|
| Mature sequence |
Rno-Mir-670_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UUUCCUCAGAUACAUUCAGGAGUGU -63
Get sequence
|
|---|
