MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-670

Family name MIR-670 (all species)
Seed UUCCUCA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-670
Paralogues
Orthologues Bta-Mir-670  Cja-Mir-670  Dno-Mir-670  Eca-Mir-670  Hsa-Mir-670  Laf-Mir-670  Mml-Mir-670  Mmr-Mir-670  Mmu-Mir-670  Ocu-Mir-670  Pab-Mir-670  Rno-Mir-670 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_72: 3601388-3601451 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-670)		 Mir-670 scaffold_72: 3601388-3601451 [+] UCSC
Mir-129-P1 scaffold_72: 3626366-3626428 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GCCACAUCCAGUUUUAGGGGUGGAUCUGGUGUCCCUGAGUGUAUGUGGUGAACCUGAAUUUGCCUUGGGUUUCCUCAUACUCAUUCAGGAGUGUCAGUCGCCCCUGCACACGACGUUGGAAAGC
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Structure
        10            20        30        40         50        60 
GCCACAUCCAGUUUUAG----|     AU   GU UC        UA    - UG    UGAAUU 
                     GGGUGG  CUG  G  CCUGAGUG  UGUG G  AACC      \
                     CCCGCU  GAC  U  GGACUUAC  AUAC C  UUGG      U
CGAAAGGUUGCAGCACACGUC^     --   UG GA        UC    U CU    GUUCCG 
  120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-670_5p* (predicted)
mirBase accessionMIMAT0047367
Sequence 
0- GUCCCUGAGUGUAUGUGGUGAACC -24
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Mature sequence

Cpo-Mir-670_3p
mirBase accessionMIMAT0047368
Sequence 
39- UUUCCUCAUACUCAUUCAGGAGUGU -64
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