| MirGeneDB ID | Pab-Mir-670 |
|---|---|
| Family name | MIR-670 (all species) |
| Seed | UUCCUCA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-670 Cja-Mir-670 Cpo-Mir-670 Dno-Mir-670 Eca-Mir-670 Hsa-Mir-670 Laf-Mir-670 Mml-Mir-670 Mmr-Mir-670 Mmu-Mir-670 Ocu-Mir-670 Rno-Mir-670 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054688.2: 23585122-23585185 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGCCUCAUCCAGUUUAGGGGUGGACCUGAUGUCCCUGAGUGUAUGUGGUGAACCUGAAUUUGCCUUGGGUUUCCUCAUAUUCAUUCAGGAGUGUCAGUUGCCCCUUCACGCGACGUUGGAGAGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGCCUCAUCCAGUUUAG----| UG AC UC U - UG UGAAUU GGG G CUGAUG CCUGAGUG AUGUG G AACC \ CCC U GACUGU GGACUUAC UAUAC C UUGG U CGAGAGGUUGCAGCGCACUUC^ GU -- GA U U CU GUUCCG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-670_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUCCCUGAGUGUAUGUGGUGAACC -24
Get sequence
|
| Mature sequence | Pab-Mir-670_3p |
| mirBase accession | None |
| Sequence |
39- UUUCCUCAUAUUCAUUCAGGAGUGU -64
Get sequence
|
