| MirGeneDB ID | Pab-Mir-670 |
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| Family name |
MIR-670 (all species) |
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| Seed |
UUCCUCA |
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| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-670
Cja-Mir-670
Cpo-Mir-670
Dno-Mir-670
Eca-Mir-670
Hsa-Mir-670
Laf-Mir-670
Mml-Mir-670
Mmr-Mir-670
Mmu-Mir-670
Ocu-Mir-670
Rno-Mir-670
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054688.2: 23585122-23585185 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGCCUCAUCCAGUUUAGGGGUGGACCUGAUGUCCCUGAGUGUAUGUGGUGAACCUGAAUUUGCCUUGGGUUUCCUCAUAUUCAUUCAGGAGUGUCAGUUGCCCCUUCACGCGACGUUGGAGAGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGCCUCAUCCAGUUUAG----| UG AC UC U - UG UGAAUU
GGG G CUGAUG CCUGAGUG AUGUG G AACC \
CCC U GACUGU GGACUUAC UAUAC C UUGG U
CGAGAGGUUGCAGCGCACUUC^ GU -- GA U U CU GUUCCG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Pab-Mir-670_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- GUCCCUGAGUGUAUGUGGUGAACC -24
Get sequence
|
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| Mature sequence |
Pab-Mir-670_3p |
| mirBase accession | None |
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| Sequence |
39- UUUCCUCAUAUUCAUUCAGGAGUGU -64
Get sequence
|
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