| MirGeneDB ID | Laf-Mir-670 |
|---|---|
| Family name | MIR-670 (all species) |
| Seed | UUCCUCA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-670 Cja-Mir-670 Cpo-Mir-670 Dno-Mir-670 Eca-Mir-670 Hsa-Mir-670 Mml-Mir-670 Mmr-Mir-670 Mmu-Mir-670 Ocu-Mir-670 Pab-Mir-670 Rno-Mir-670 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010048.1: 6092027-6092090 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UGCCACGUGCAGUUCAGGGGUGGGUCUGACGUCCCUGAGUGUAUGCGGUGAACCUGAAUUUGCCUUGGGUUUCCUCAUACUCAUUCAGGAGUGUCAGUUCCCCCUUCACUCGUCGUUGGAGAGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 UGCCACGUGCAGUUCAG--- U GU UC --| C U UGAAUU GGG GG CUGACG CCUGAGU GUAUG GG GAACC \ CCC CC GACUGU GGACUUA CAUAC CC UUUGG U CGAGAGGUUGCUGCUCACUU - UU GA CU^ U - GUUCCG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Yes |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-670_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUCCCUGAGUGUAUGCGGUGAACC -24
Get sequence
|
| Mature sequence | Laf-Mir-670_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UUUCCUCAUACUCAUUCAGGAGUGU -64
Get sequence
|
