MirGeneDB 3.0

MirGeneDB ID

Cja-Mir-760

Family name MIR-760 (all species)
Seed GGCUCUG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-760  Cpo-Mir-760  Dno-Mir-760  Eca-Mir-760  Ete-Mir-760  Hsa-Mir-760  Laf-Mir-760  Mml-Mir-760  Mmr-Mir-760  Mmu-Mir-760  Ocu-Mir-760  Pab-Mir-760  Rno-Mir-760 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)
CM021921.1: 128993303-128993360 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGGAUGCCGCGGAGCGGGGCGCGUCGCCCCCCUCAGUCCACCAGAGCCCGGAUACCUCAGAAAUUCGGCUCUGGGUCUGUGGGGAGCGAAAUGCAACCCAAACCCCGUUUUUCUGA
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Structure
        10         20         30        40        50         
GGAGGAUGCCGCGGAGC-  G-|  CG    C    U   UCCA        CGGAUACC 
                  GG  GCG  UCGC CCCC CAG    CCAGAGCC        U
                  CC  CGU  AGCG GGGG GUC    GGUCUCGG        C
AGUCUUUUUGCCCCAAAC  AA^  AA    A    U   UG--        CUUAAAGA 
      110       100        90        80          70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Cja-Mir-760_5p* (predicted)

mirBase accessionNone
Sequence
0- CCCCUCAGUCCACCAGAGCCCGG -23
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Mature sequence

Cja-Mir-760_3p (predicted)

mirBase accessionNone
Sequence
37- CGGCUCUGGGUCUGUGGGGAG -58
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