MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-760

Family name MIR-760 (all species)
Seed GGCUCUG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-760  Cja-Mir-760  Cpo-Mir-760  Dno-Mir-760  Eca-Mir-760  Ete-Mir-760  Hsa-Mir-760  Laf-Mir-760  Mml-Mir-760  Mmr-Mir-760  Mmu-Mir-760  Ocu-Mir-760  Rno-Mir-760 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054679.2: 139138914-139138971 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGGAUGCUGCGGCGCGGGGCGCGUCGCCCCCCUCAGUCUACCAGAGCCCGGAUACCUCAGAAAUUCGGCUCUGGGUCUGUGGGGAGCGAAAUGCAACCCAAACCCCGUUUUUCCGA
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Structure
        10         20         30        40        50          
GGAGGAUGCUGCGGCGC-  G-|  CG    C    U   UCUA        C   UACCU 
                  GG  GCG  UCGC CCCC CAG    CCAGAGCC GGA     \
                  CC  CGU  AGCG GGGG GUC    GGUCUCGG CUU     C
AGCCUUUUUGCCCCAAAC  AA^  AA    A    U   UG--        -   AAAGA 
      110       100        90        80          70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Br Li Li
Star sequence

Pab-Mir-760_5p* (predicted)

mirBase accessionNone
Sequence
0- CCCCUCAGUCUACCAGAGCCCGGA -24
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Mature sequence

Pab-Mir-760_3p

mirBase accessionNone
Sequence
37- CGGCUCUGGGUCUGUGGGGAG -58
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