| MirGeneDB ID | Ete-Mir-760 |
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| Family name |
MIR-760 (all species) |
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| Seed |
GGCUCUG |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-760
Cpo-Mir-760
Dno-Mir-760
Hsa-Mir-760
Mml-Mir-760
Mmu-Mir-760
Ocu-Mir-760
Rno-Mir-760
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(echTel2) |
scaffold_287966: 11089-11146 [-]
UCSC
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Precursor
(pre-Mir +30nt flank) |
CAGGGACGCUGCGGCACGGGGCGCGUCGCCCCGCUCAGUCCGCCAGAGCGCGGAUGUCUCCGAAAUUCGGCUCUGGGUCUGUGGGGUGCGAAAUGCAACCCCCCUCCCGAGCCCCGCG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CAGGGACGCUGCGGCAC- G- CG -| GCU U GC G UGUCU
GG GCG UCGC CCC CAG CC CAGAGC CGGA \
CC CGU AGCG GGG GUC GG GUCUCG GCUU C
GCGCCCCGAGCCCUCCCC AA AA U^ GU- U -- - AAAGC
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Star sequence |
Ete-Mir-760_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CCGCUCAGUCCGCCAGAGCGCGGA -24
Get sequence
|
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| Mature sequence |
Ete-Mir-760_3p |
| mirBase accession | None |
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| Sequence |
37- CGGCUCUGGGUCUGUGGGGUG -58
Get sequence
|
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