MirGeneDB ID | Laf-Mir-760 |
Family name |
MIR-760 (all species) |
Seed |
GGCUCUG |
Species |
African bush elephant (Loxodonta africana) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-760
Cja-Mir-760
Cpo-Mir-760
Dno-Mir-760
Eca-Mir-760
Ete-Mir-760
Hsa-Mir-760
Mml-Mir-760
Mmr-Mir-760
Mmu-Mir-760
Ocu-Mir-760
Pab-Mir-760
Rno-Mir-760
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000001905.1_Loxafr3.0) |
GL010087.1: 7956846-7956905 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGAGGCUGCUGCGGCGCGGGGCACGUCGUCCCCCUCAGCCCACCAGAGCCCGGAUACCUCAGAAAUUCGGCUCUGGGUCUGUGGAGGAGCGAAAUGCAACCCAAACACCAUUUCACCGAA
Get precursor sequence
|
Structure | 10 20 30 40 50
GGAGGCUGCUGCGGCGC- -- CG UC -| U CCCA C UACCU
GGG GCA UCG CC CC CAG CCAGAGCC GGA \
CCC CGU AGC GG GG GUC GGUCUCGG CUU C
AAGCCACUUUACCACAAA AA AA GA A^ U UG-- - AAAGA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Laf-Mir-760_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CCCCUCAGCCCACCAGAGCCCGGA -24
Get sequence
|
Mature sequence |
Laf-Mir-760_3p (predicted) |
mirBase accession | None |
Sequence |
37- CGGCUCUGGGUCUGUGGAGGAGC -60
Get sequence
|