MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-760

Family name MIR-760 (all species)
Seed GGCUCUG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-760  Cja-Mir-760  Cpo-Mir-760  Dno-Mir-760  Eca-Mir-760  Ete-Mir-760  Hsa-Mir-760  Mml-Mir-760  Mmr-Mir-760  Mmu-Mir-760  Ocu-Mir-760  Pab-Mir-760  Rno-Mir-760 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010087.1: 7956846-7956905 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGGCUGCUGCGGCGCGGGGCACGUCGUCCCCCUCAGCCCACCAGAGCCCGGAUACCUCAGAAAUUCGGCUCUGGGUCUGUGGAGGAGCGAAAUGCAACCCAAACACCAUUUCACCGAA
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Structure
        10         20          30         40        50          
GGAGGCUGCUGCGGCGC-   --   CG   UC  -| U   CCCA        C   UACCU 
                  GGG  GCA  UCG  CC CC CAG    CCAGAGCC GGA     \
                  CCC  CGU  AGC  GG GG GUC    GGUCUCGG CUU     C
AAGCCACUUUACCACAAA   AA   AA   GA  A^ U   UG--        -   AAAGA 
.       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Wh
Star sequence

Laf-Mir-760_5p* (predicted)

mirBase accessionNone
Sequence
0- CCCCUCAGCCCACCAGAGCCCGGA -24
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Mature sequence

Laf-Mir-760_3p (predicted)

mirBase accessionNone
Sequence
37- CGGCUCUGGGUCUGUGGAGGAGC -60
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