| MirGeneDB ID | Ocu-Mir-760 |
|---|
| Family name |
MIR-760 (all species) |
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| Seed |
GGCUCUG |
|---|
| Species |
Rabbit (Oryctolagus cuniculus) |
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| MiRBase ID |
ocu-mir-760
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-760
Cja-Mir-760
Cpo-Mir-760
Dno-Mir-760
Eca-Mir-760
Ete-Mir-760
Hsa-Mir-760
Laf-Mir-760
Mml-Mir-760
Mmr-Mir-760
Mmu-Mir-760
Pab-Mir-760
Rno-Mir-760
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(oryCun2_add) |
chr13: 70644983-70645042 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GAGGAUGCUGCGGCCCCGGGGGCGCGUCGCCCCCCUCAGUCCACCAGAGCCCGGAUACCUCAGAAAUUCGGCUCUGGGUCUGUGGGGAGCGAAAUGCAACCCAAACCCCCCCUUUUUUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAGGAUGCUGCGGCCCC- G-| CG C U UCCA C UACCU
GGG GCG UCGC CCCC CAG CCAGAGCC GGA \
CCC CGU AGCG GGGG GUC GGUCUCGG CUU C
UUUUUUUUCCCCCCCAAA AA^ AA A U UG-- - AAAGA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | The rabbit Drosha cut is -1 relative to most other mammals and is a Group 1 rather than a Group 2 miRNA. |
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Ocu-Mir-760_5p* |
| mirBase accession | MIMAT0048567 |
|---|
| Sequence |
0- CCCCCUCAGUCCACCAGAGCCCGGA -25
Get sequence
|
|---|
| Mature sequence |
Ocu-Mir-760_3p |
| mirBase accession | MIMAT0048568 |
|---|
| Sequence |
38- CGGCUCUGGGUCUGUGGGGAGC -60
Get sequence
|
|---|
