MirGeneDB ID | Eca-Mir-760 |
Family name |
MIR-760 (all species) |
Seed |
GGCUCUG |
Species |
Horse (Equus caballus) |
MiRBase ID |
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Paralogues |
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Orthologues |
Bta-Mir-760
Cja-Mir-760
Cpo-Mir-760
Dno-Mir-760
Ete-Mir-760
Hsa-Mir-760
Laf-Mir-760
Mml-Mir-760
Mmr-Mir-760
Mmu-Mir-760
Ocu-Mir-760
Pab-Mir-760
Rno-Mir-760
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Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCA_002863925.1_EquCab3.0) |
CM009152.1: 68041388-68041445 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
CGGAGGAUGCUGCAGCCGGGGCGCGUCGCCCCCCGCAGUCCACCAGAGCCCGGAUACCUCCGAAAUUCGGCUCUGGGUCUGUGGGGAGCGAAAUGCAACCCAAACCCCGUUUUACCCA
Get precursor sequence
|
Structure | 10 20 30 40 50
CGGAGGAUGCUGCAGCC- G-| CG C UCCA C UACCU
GG GCG UCGC CCCCGCAG CCAGAGCC GGA \
CC CGU AGCG GGGGUGUC GGUCUCGG CUU C
ACCCAUUUUGCCCCAAAC AA^ AA A UG-- - AAAGC
110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | CNNC at 3p(+17) |
Tissue expression
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Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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Star sequence |
Eca-Mir-760_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CCCCGCAGUCCACCAGAGCCCGGA -24
Get sequence
|
Mature sequence |
Eca-Mir-760_3p |
mirBase accession | None |
Sequence |
37- CGGCUCUGGGUCUGUGGGGAG -58
Get sequence
|