| MirGeneDB ID | Eca-Mir-760 |
|---|
| Family name |
MIR-760 (all species) |
|---|
| Seed |
GGCUCUG |
|---|
| Species |
Horse (Equus caballus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-760
Cja-Mir-760
Cpo-Mir-760
Dno-Mir-760
Ete-Mir-760
Hsa-Mir-760
Laf-Mir-760
Mml-Mir-760
Mmr-Mir-760
Mmu-Mir-760
Ocu-Mir-760
Pab-Mir-760
Rno-Mir-760
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_002863925.1_EquCab3.0) |
CM009152.1: 68041388-68041445 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CGGAGGAUGCUGCAGCCGGGGCGCGUCGCCCCCCGCAGUCCACCAGAGCCCGGAUACCUCCGAAAUUCGGCUCUGGGUCUGUGGGGAGCGAAAUGCAACCCAAACCCCGUUUUACCCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGGAGGAUGCUGCAGCC- G-| CG C UCCA C UACCU
GG GCG UCGC CCCCGCAG CCAGAGCC GGA \
CC CGU AGCG GGGGUGUC GGUCUCGG CUU C
ACCCAUUUUGCCCCAAAC AA^ AA A UG-- - AAAGC
110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
Er |
| |
|
|
|---|
| Star sequence |
Eca-Mir-760_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CCCCGCAGUCCACCAGAGCCCGGA -24
Get sequence
|
|---|
| Mature sequence |
Eca-Mir-760_3p |
| mirBase accession | None |
|---|
| Sequence |
37- CGGCUCUGGGUCUGUGGGGAG -58
Get sequence
|
|---|
