MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-146-P2

Family name MIR-146 (all species)
Seed GAGAACU
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-146c
Paralogues Cli-Mir-146-P1  Cli-Mir-146-P4 
Orthologues Aca-Mir-146-P2  Ami-Mir-146-P2  Cmi-Mir-146-P2  Cpi-Mir-146-P2  Ebu-Mir-146  Gga-Mir-146-P2  Gja-Mir-146-P2  Lch-Mir-146-P2  Mun-Mir-146-P2-v1  Mun-Mir-146-P2-v2  Pbv-Mir-146-P2  Pma-Mir-146  Spt-Mir-146-P2  Sto-Mir-146-P2  Tgu-Mir-146-P2  Xla-Mir-146-P2a  Xla-Mir-146-P2b  Xtr-Mir-146-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(colLiv2)		 scaffold203: 1412191-1412255 [-]
Precursor
(pre-Mir +30nt flank)
AGAUGUGAUGAAUUUGGCAGUUCCCAGCUCUGAGAACUGAAUUCCAUGGACUGGUUCCAGUUCCAUGUGUUCAGUCCAUGGUAUUCAGUUCUCUAGCUUGGCUGCAUCGAACUUCACGACUGCGA
Get precursor sequence
Structure
        10         20         30        40        50        60  
AGAUGUGAUGAAUUUGGCA-  UC  -|   CU           U          GUUCCAGU 
                    GU  CC AGCU  GAGAACUGAAU CCAUGGACUG        U
                    CG  GG UCGA  CUCUUGACUUA GGUACCUGAC        C
AGCGUCAGCACUUCAAGCUA  UC  U^   U-           U          UUGUGUAC 
   120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Li Mi Ov Pe Te To
Mature sequence

Cli-Mir-146-P2_5p
mirBase accessionMIMAT0038539
Sequence 
0- UGAGAACUGAAUUCCAUGGACUG -23
Get sequence
Star sequence

Cli-Mir-146-P2_3p*
mirBase accessionMIMAT0038540
Sequence 
43- GUCCAUGGUAUUCAGUUCUCUA -65
Get sequence