MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-146-P2

Family name MIR-146 (all species)
Seed GAGAACU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-146-P4 
Orthologues Aca-Mir-146-P2  Ami-Mir-146-P2  Cli-Mir-146-P2  Cmi-Mir-146-P2  Cpi-Mir-146-P2  Ebu-Mir-146  Gga-Mir-146-P2  Gja-Mir-146-P2  Lch-Mir-146-P2  Mun-Mir-146-P2-v1  Mun-Mir-146-P2-v2  Pbv-Mir-146-P2  Pma-Mir-146  Spt-Mir-146-P2  Tgu-Mir-146-P2  Xla-Mir-146-P2a  Xla-Mir-146-P2b  Xtr-Mir-146-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01009135.1: 120567-120631 [+]
Precursor
(pre-Mir +30nt flank)
CAGAAGAUGGAUUUUGGCAGCUCCCAGCUAUGAGAACUGAAUUCCAUGGGCUGGUUGCACACUUUAUUUCUCAGUCCAUAGUAGACAGUUCUCCAGCUUGGCUGCUUCGUCCUUCAGCAUUUCUU
Get precursor sequence
Structure
        10         20         30        40        50        60  
CAGAAGAUGGAUUUUGGC-   UC  -|   AU        AAUUCC       GGUUGCACA 
                   AGC  CC AGCU  GAGAACUG      AUGGGCU         C
                   UCG  GG UCGA  CUCUUGAC      UACCUGA         U
UUCUUUACGACUUCCUGCU   UC  U^   C-        AGAUGA       CUCUUUAUU 
   120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-146-P2_5p
mirBase accessionNone
Sequence 
0- UGAGAACUGAAUUCCAUGGGCU -22
Get sequence
Star sequence

Sto-Mir-146-P2_3p*
mirBase accessionNone
Sequence 
44- UCCAUAGUAGACAGUUCUCCA -65
Get sequence