MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-146-P2

Family name MIR-146 (all species)
Seed GAGAACU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-146b
Paralogues Aca-Mir-146-P1 
Orthologues Ami-Mir-146-P2  Cli-Mir-146-P2  Cmi-Mir-146-P2  Cpi-Mir-146-P2  Ebu-Mir-146  Gga-Mir-146-P2  Gja-Mir-146-P2  Lch-Mir-146-P2  Mun-Mir-146-P2-v1  Mun-Mir-146-P2-v2  Pbv-Mir-146-P2  Pma-Mir-146  Spt-Mir-146-P2  Sto-Mir-146-P2  Tgu-Mir-146-P2  Xla-Mir-146-P2a  Xla-Mir-146-P2b  Xtr-Mir-146-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL343301.1: 1588682-1588746 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAAGGAGAACUCUGGCAGUUCCAAGCUUUGAGAACUGGUUUUCGUGGACUGGUUUCCAUUUAGUCUUCUCAGUCCAUAAUGCUCAGUUUUCCAGCUUGGCUGCACCUGGCAUCAUAAUUUUGG
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Structure
        10         20         30         40        50        60  
UUAAAGGAGAACUCUGGCA-  U-|      UU        -  UUUC        GUUUCCAU 
                    GU  CCAAGCU  GAGAACUG GU    GUGGACUG        U
                    CG  GGUUCGA  CUUUUGAC CG    UACCUGAC        U
GGUUUUAAUACUACGGUCCA  UC^      C-        U  UAA-        UCUUCUGA 
   120       110       100         90        80         70
Deep sequencing
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CommentIt is likely that this miRNA is monouridylated but there are not enough reads to make this determination.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-146-P2_5p
mirBase accessionMIMAT0021777
Sequence 
0- UGAGAACUGGUUUUCGUGGACUG -23
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Star sequence

Aca-Mir-146-P2_3p*
mirBase accessionMIMAT0021778
Sequence 
43- GUCCAUAAUGCUCAGUUUUCCA -65
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