MirGeneDB 3.0
MirGeneDB ID

Cmi-Mir-456

Family name MIR-456 (all species)
Seed AGGCUGG
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-456  Ami-Mir-456  Cli-Mir-456  Cpi-Mir-456  Dre-Mir-456  Ebu-Mir-456  Gga-Mir-456  Gja-Mir-456  Gmo-Mir-456  Lch-Mir-456  Loc-Mir-456  Mal-Mir-456  Mun-Mir-456  Pbv-Mir-456  Pma-Mir-456  Sto-Mir-456  Tgu-Mir-456  Xla-Mir-456-P1  Xla-Mir-456-P2  Xtr-Mir-456 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635916.1: 3552896-3552956 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUGCGCUUUGAAGCCACUGUGUGUGAGAGCAGGUAUCUUCCCAGCCUACACGUAGGUCCUGAAAUCUGCAGGCUGGUUUGAUGGUUGUCUUGCACACAGCAAGUGUGAAAUGUAAAUGC
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Structure
        10          20        30        40        50        60
UGUUGCGCUUUGAAGCCA--|      UG   G   G    UUC       A  CGUAGGU 
                    CUGUGUG  AGA CAG UAUC   CCAGCCU CA       C
                    GACACAC  UCU GUU GUAG   GGUCGGA GU       C
CGUAAAUGUAAAGUGUGAAC^      GU   -   G    UUU       C  CUAAAGU 
 .       110       100        90         80        70
Deep sequencing
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CommentBased on structural and phylogenetic considerations it is assumed that the templated 3' U is a post-transcriptional addition.
3' NTU Yes
MotifsNo
Tissue expression
-   +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Star sequence

Cmi-Mir-456_5p*
mirBase accessionNone
Sequence 
0- GCAGGUAUCUUCCCAGCCUACA -22
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Mature sequence

Cmi-Mir-456_3p
mirBase accessionNone
Sequence 
40- CAGGCUGGUUUGAUGGUUGUC -61
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